RNA velocity

CellRank for directed single-cell fate mapping
Computational trajectory inference enables the reconstruction of cell state dynamics from single-cell RNA sequencing experiments. …
Marius Lange, Volker Bergen, Michal Klein, Manu Setty, Bernhard Reuter, Mostafa Bakhti, Heiko Lickert, Meshal Ansari, Janine Schniering, Herbert B Schiller, Dana Pe’er, Fabian J Theis
Code DOI
CellRank for directed single-cell fate mapping
CellRank for directed single-cell fate mapping (ISMB/ECCB)
Computational trajectory inference enables the reconstruction of cell state dynamics from single-cell RNA sequencing experiments. …
Jul 12, 2021 4:00 PM — Jul 11, 2021 10:00 PM ISMB/ECCB
Marius Lange
CellRank for directed single-cell fate mapping (ISMB/ECCB)
Generalizing RNA velocity to transient cell states through dynamical modeling
RNA velocity has opened up new ways of studying cellular differentiation in single-cell RNA-sequencing data. It describes the rate of …
Volker Bergen, Marius Lange, Stefan Peidli, F Alexander Wolf, Fabian J Theis
Code DOI
Generalizing RNA velocity to transient cell states through dynamical modeling